Cluster: HRGMv2_2839_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2839
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2839_3 | HRGMv2_2839_3_33 | 44612 | 45634 | + | 3.A.1.5.32 |
| TC | HRGMv2_2839_3 | HRGMv2_2839_3_34 | 45650 | 47599 | + | 3.A.1.5.20 |
| TC | HRGMv2_2839_3 | HRGMv2_2839_3_35 | 47618 | 48649 | + | 3.A.1.5.20 |
| TC | HRGMv2_2839_3 | HRGMv2_2839_3_36 | 48597 | 50201 | + | 3.A.1.5.20 |
| NULL(UNKNOWN) | HRGMv2_2839_3 | HRGMv2_2839_3_37 | 50238 | 50432 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2839_3 | HRGMv2_2839_3_38 | 50820 | 51995 | - | CE7 |
| CAZyme | HRGMv2_2839_3 | HRGMv2_2839_3_39 | 51999 | 53723 | - | GH2 |
Gene ID: HRGMv2_2839_3_33
Type: TC
Location: 44612 - 45634 (+)
Type: TC
Location: 44612 - 45634 (+)
Gene ID: HRGMv2_2839_3_34
Type: TC
Location: 45650 - 47599 (+)
Type: TC
Location: 45650 - 47599 (+)
Gene ID: HRGMv2_2839_3_35
Type: TC
Location: 47618 - 48649 (+)
Type: TC
Location: 47618 - 48649 (+)
Gene ID: HRGMv2_2839_3_36
Type: TC
Location: 48597 - 50201 (+)
Type: TC
Location: 48597 - 50201 (+)
Gene ID: HRGMv2_2839_3_37
Type:
Location: 50238 - 50432 (+)
Type:
Location: 50238 - 50432 (+)
Gene ID: HRGMv2_2839_3_38
Type: CAZyme
Location: 50820 - 51995 (-)
Type: CAZyme
Location: 50820 - 51995 (-)
Gene ID: HRGMv2_2839_3_39
Type: CAZyme
Location: 51999 - 53723 (-)
Type: CAZyme
Location: 51999 - 53723 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-724
Species
CAG-724 sp905202255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.