Cluster: HRGMv2_2839_CGC4
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2839
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2839_2 | HRGMv2_2839_2_101 | 114547 | 115119 | + | 2.A.107.1.2 |
| TF | HRGMv2_2839_2 | HRGMv2_2839_2_102 | 115277 | 115483 | + | 0043707 |
| TF | HRGMv2_2839_2 | HRGMv2_2839_2_103 | 115624 | 116073 | + | MarR |
| TC | HRGMv2_2839_2 | HRGMv2_2839_2_104 | 116070 | 117398 | + | 2.A.66.1.37 |
| NULL(UNKNOWN) | HRGMv2_2839_2 | HRGMv2_2839_2_105 | 117557 | 118117 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2839_2 | HRGMv2_2839_2_106 | 118117 | 119385 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_2839_2 | HRGMv2_2839_2_107 | 119478 | 121718 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2839_2 | HRGMv2_2839_2_108 | 121687 | 122595 | - | 3.A.1.132.6 |
| TF | HRGMv2_2839_2 | HRGMv2_2839_2_109 | 122588 | 122965 | - | GntR |
| pfam | HRGMv2_2839_2 | HRGMv2_2839_2_110 | 123159 | 124949 | + | Lactamase_B | Flavin_Reduct | ODP | RUBY_RBDX |
| CAZyme | HRGMv2_2839_2 | HRGMv2_2839_2_111 | 125486 | 126205 | - | GT2 |
Gene ID: HRGMv2_2839_2_101
Type: TC
Location: 114547 - 115119 (+)
Type: TC
Location: 114547 - 115119 (+)
Gene ID: HRGMv2_2839_2_102
Type: TF
Location: 115277 - 115483 (+)
Type: TF
Location: 115277 - 115483 (+)
Gene ID: HRGMv2_2839_2_103
Type: TF
Location: 115624 - 116073 (+)
Type: TF
Location: 115624 - 116073 (+)
Gene ID: HRGMv2_2839_2_104
Type: TC
Location: 116070 - 117398 (+)
Type: TC
Location: 116070 - 117398 (+)
Gene ID: HRGMv2_2839_2_105
Type:
Location: 117557 - 118117 (-)
Type:
Location: 117557 - 118117 (-)
Gene ID: HRGMv2_2839_2_106
Type: CAZyme
Location: 118117 - 119385 (-)
Type: CAZyme
Location: 118117 - 119385 (-)
Gene ID: HRGMv2_2839_2_107
Type:
Location: 119478 - 121718 (-)
Type:
Location: 119478 - 121718 (-)
Gene ID: HRGMv2_2839_2_108
Type: TC
Location: 121687 - 122595 (-)
Type: TC
Location: 121687 - 122595 (-)
Gene ID: HRGMv2_2839_2_109
Type: TF
Location: 122588 - 122965 (-)
Type: TF
Location: 122588 - 122965 (-)
Gene ID: HRGMv2_2839_2_110
Type: pfam
Location: 123159 - 124949 (+)
Type: pfam
Location: 123159 - 124949 (+)
Gene ID: HRGMv2_2839_2_111
Type: CAZyme
Location: 125486 - 126205 (-)
Type: CAZyme
Location: 125486 - 126205 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-724
Species
CAG-724 sp905202255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.