Cluster: HRGMv2_2839_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2839
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2839_24 | HRGMv2_2839_24_9 | 10611 | 12083 | - | GH77 |
| pfam | HRGMv2_2839_24 | HRGMv2_2839_24_10 | 12089 | 14092 | - | LRR_5 | LRR_5 | LRR_5 |
| pfam | HRGMv2_2839_24 | HRGMv2_2839_24_11 | 14272 | 15741 | + | SpoIVA_ATPase | SpoIVA_middle | SpoIVA_C |
| TC | HRGMv2_2839_24 | HRGMv2_2839_24_12 | 15892 | 17370 | + | 9.A.11.1.1 |
Gene ID: HRGMv2_2839_24_9
Type: CAZyme
Location: 10611 - 12083 (-)
Type: CAZyme
Location: 10611 - 12083 (-)
Gene ID: HRGMv2_2839_24_10
Type: pfam
Location: 12089 - 14092 (-)
Type: pfam
Location: 12089 - 14092 (-)
Gene ID: HRGMv2_2839_24_11
Type: pfam
Location: 14272 - 15741 (+)
Type: pfam
Location: 14272 - 15741 (+)
Gene ID: HRGMv2_2839_24_12
Type: TC
Location: 15892 - 17370 (+)
Type: TC
Location: 15892 - 17370 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-724
Species
CAG-724 sp905202255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.