Cluster: HRGMv2_2839_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2839
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2839_8 | HRGMv2_2839_8_53 | 54496 | 55596 | + | GT28 |
| NULL(UNKNOWN) | HRGMv2_2839_8 | HRGMv2_2839_8_54 | 55607 | 55927 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2839_8 | HRGMv2_2839_8_55 | 55984 | 58896 | - | GH94 |
| pfam | HRGMv2_2839_8 | HRGMv2_2839_8_56 | 58907 | 59668 | - | Acetyltransf_1 | Acetyltransf_9 |
| pfam | HRGMv2_2839_8 | HRGMv2_2839_8_57 | 59730 | 60419 | - | CpsB_CapC |
| TC | HRGMv2_2839_8 | HRGMv2_2839_8_58 | 60416 | 61234 | - | 8.A.3.1.2 |
Gene ID: HRGMv2_2839_8_53
Type: CAZyme
Location: 54496 - 55596 (+)
Type: CAZyme
Location: 54496 - 55596 (+)
Gene ID: HRGMv2_2839_8_54
Type:
Location: 55607 - 55927 (+)
Type:
Location: 55607 - 55927 (+)
Gene ID: HRGMv2_2839_8_55
Type: CAZyme
Location: 55984 - 58896 (-)
Type: CAZyme
Location: 55984 - 58896 (-)
Gene ID: HRGMv2_2839_8_56
Type: pfam
Location: 58907 - 59668 (-)
Type: pfam
Location: 58907 - 59668 (-)
Gene ID: HRGMv2_2839_8_57
Type: pfam
Location: 59730 - 60419 (-)
Type: pfam
Location: 59730 - 60419 (-)
Gene ID: HRGMv2_2839_8_58
Type: TC
Location: 60416 - 61234 (-)
Type: TC
Location: 60416 - 61234 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-724
Species
CAG-724 sp905202255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.