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Cluster: HRGMv2_2832_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2832_6 HRGMv2_2832_6_15 21376 22224 - 3.A.1.1.39
TC HRGMv2_2832_6 HRGMv2_2832_6_16 22233 23123 - 3.A.1.1.17
STP HRGMv2_2832_6 HRGMv2_2832_6_17 23120 25846 - SBP_bac_1
TC HRGMv2_2832_6 HRGMv2_2832_6_18 25860 26825 - 3.A.1.1.33
NULL(UNKNOWN) HRGMv2_2832_6 HRGMv2_2832_6_19 26822 27742 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2832_6 HRGMv2_2832_6_20 27773 28174 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2832_6 HRGMv2_2832_6_21 28313 29056 - GH109
Gene ID: HRGMv2_2832_6_15
Type: TC
Location: 21376 - 22224 (-)
Gene ID: HRGMv2_2832_6_16
Type: TC
Location: 22233 - 23123 (-)
Gene ID: HRGMv2_2832_6_17
Type: STP
Location: 23120 - 25846 (-)
Gene ID: HRGMv2_2832_6_18
Type: TC
Location: 25860 - 26825 (-)
Gene ID: HRGMv2_2832_6_19
Type:
Location: 26822 - 27742 (-)
Gene ID: HRGMv2_2832_6_20
Type:
Location: 27773 - 28174 (-)
Gene ID: HRGMv2_2832_6_21
Type: CAZyme
Location: 28313 - 29056 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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