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Cluster: HRGMv2_2832_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2832_5 HRGMv2_2832_5_31 29294 31471 - GH36
STP HRGMv2_2832_5 HRGMv2_2832_5_32 31540 32088 - NUDIX
peptidase HRGMv2_2832_5 HRGMv2_2832_5_33 32129 33034 + M14.UNC
TC HRGMv2_2832_5 HRGMv2_2832_5_34 33076 34491 - 3.B.1.1.6
TC HRGMv2_2832_5 HRGMv2_2832_5_35 34507 35721 - 3.B.1.1.2
TC HRGMv2_2832_5 HRGMv2_2832_5_36 35741 36115 - 3.B.1.1.2
Gene ID: HRGMv2_2832_5_31
Type: CAZyme
Location: 29294 - 31471 (-)
Gene ID: HRGMv2_2832_5_32
Type: STP
Location: 31540 - 32088 (-)
Gene ID: HRGMv2_2832_5_33
Type: peptidase
Location: 32129 - 33034 (+)
Gene ID: HRGMv2_2832_5_34
Type: TC
Location: 33076 - 34491 (-)
Gene ID: HRGMv2_2832_5_35
Type: TC
Location: 34507 - 35721 (-)
Gene ID: HRGMv2_2832_5_36
Type: TC
Location: 35741 - 36115 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2832_5_31 vegetarian > omnivore 1.78640 0.04753
HRGMv2_2832_5_32 vegetarian > vegan 1.93431 0.00082
HRGMv2_2832_5_33 vegetarian > vegan 2.85154 0.00082
HRGMv2_2832_5_34 vegetarian > vegan 1.38777 0.00082
HRGMv2_2832_5_36 vegetarian > vegan 1.75318 0.00082

🧭 Explore Read Mapping of CGC

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