Cluster: HRGMv2_2832_CGC21
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_2832
- CGC Family ID: CGCFAM_02969
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2832_32 | HRGMv2_2832_32_12 | 4916 | 6193 | - | GH109 |
| CAZyme | HRGMv2_2832_32 | HRGMv2_2832_32_13 | 6205 | 7782 | - | GH36 |
| CAZyme | HRGMv2_2832_32 | HRGMv2_2832_32_14 | 7784 | 9274 | - | GH78 |
| NULL(UNKNOWN) | HRGMv2_2832_32 | HRGMv2_2832_32_15 | 9334 | 11727 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2832_32 | HRGMv2_2832_32_16 | 11802 | 15401 | - | Dockerin_1 | CBM_4_9 | Y_phosphatase3 |
| TC | HRGMv2_2832_32 | HRGMv2_2832_32_17 | 15426 | 16292 | - | 3.A.1.1.18 |
| pfam | HRGMv2_2832_32 | HRGMv2_2832_32_18 | 16285 | 17223 | - | BPD_transp_1 |
| STP | HRGMv2_2832_32 | HRGMv2_2832_32_19 | 17256 | 18749 | - | SBP_bac_1 |
| CAZyme | HRGMv2_2832_32 | HRGMv2_2832_32_20 | 18816 | 27167 | - | CBM67 |
| TC | HRGMv2_2832_32 | HRGMv2_2832_32_21 | 27329 | 29152 | + | 8.A.59.2.1 |
Gene ID: HRGMv2_2832_32_12
Type: CAZyme
Location: 4916 - 6193 (-)
Type: CAZyme
Location: 4916 - 6193 (-)
Gene ID: HRGMv2_2832_32_13
Type: CAZyme
Location: 6205 - 7782 (-)
Type: CAZyme
Location: 6205 - 7782 (-)
Gene ID: HRGMv2_2832_32_14
Type: CAZyme
Location: 7784 - 9274 (-)
Type: CAZyme
Location: 7784 - 9274 (-)
Gene ID: HRGMv2_2832_32_15
Type:
Location: 9334 - 11727 (-)
Type:
Location: 9334 - 11727 (-)
Gene ID: HRGMv2_2832_32_16
Type: pfam
Location: 11802 - 15401 (-)
Type: pfam
Location: 11802 - 15401 (-)
Gene ID: HRGMv2_2832_32_17
Type: TC
Location: 15426 - 16292 (-)
Type: TC
Location: 15426 - 16292 (-)
Gene ID: HRGMv2_2832_32_18
Type: pfam
Location: 16285 - 17223 (-)
Type: pfam
Location: 16285 - 17223 (-)
Gene ID: HRGMv2_2832_32_19
Type: STP
Location: 17256 - 18749 (-)
Type: STP
Location: 17256 - 18749 (-)
Gene ID: HRGMv2_2832_32_20
Type: CAZyme
Location: 18816 - 27167 (-)
Type: CAZyme
Location: 18816 - 27167 (-)
Gene ID: HRGMv2_2832_32_21
Type: TC
Location: 27329 - 29152 (+)
Type: TC
Location: 27329 - 29152 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA737
Species
UBA737 sp905193585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2832_32_12 | vegetarian > vegan | 2.60849 | 0.00082 |
| HRGMv2_2832_32_13 | vegetarian > vegan | 1.73241 | 0.00082 |
| HRGMv2_2832_32_14 | vegetarian > vegan | 1.08277 | 0.00082 |
| HRGMv2_2832_32_16 | vegetarian > vegan | 1.99743 | 0.00082 |
| HRGMv2_2832_32_17 | vegetarian > vegan | 2.30180 | 0.00082 |
| HRGMv2_2832_32_18 | vegetarian > vegan | 2.92721 | 0.00082 |
| HRGMv2_2832_32_19 | vegetarian > vegan | 3.47496 | 0.00082 |
| HRGMv2_2832_32_20 | vegetarian > vegan | 1.72494 | 0.00082 |
| HRGMv2_2832_32_21 | vegetarian > vegan | 1.34755 | 0.00082 |