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Cluster: HRGMv2_2832_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2832_30 HRGMv2_2832_30_8 8277 9809 + 2.A.25.1.9
STP HRGMv2_2832_30 HRGMv2_2832_30_9 9899 11407 + CBS
CAZyme HRGMv2_2832_30 HRGMv2_2832_30_10 11407 12384 + GT2
pfam HRGMv2_2832_30 HRGMv2_2832_30_11 12371 13054 + RelA_SpoT
TC HRGMv2_2832_30 HRGMv2_2832_30_12 13136 14416 + 1.A.34.1.3
Gene ID: HRGMv2_2832_30_8
Type: TC
Location: 8277 - 9809 (+)
Gene ID: HRGMv2_2832_30_9
Type: STP
Location: 9899 - 11407 (+)
Gene ID: HRGMv2_2832_30_10
Type: CAZyme
Location: 11407 - 12384 (+)
Gene ID: HRGMv2_2832_30_11
Type: pfam
Location: 12371 - 13054 (+)
Gene ID: HRGMv2_2832_30_12
Type: TC
Location: 13136 - 14416 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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