Cluster: HRGMv2_2832_CGC17
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_2832
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2832_25 | HRGMv2_2832_25_4 | 2977 | 5274 | - | GH38 |
| CAZyme | HRGMv2_2832_25 | HRGMv2_2832_25_5 | 5293 | 7233 | - | GH151 |
| CAZyme | HRGMv2_2832_25 | HRGMv2_2832_25_6 | 7267 | 8901 | - | GH3 |
| pfam | HRGMv2_2832_25 | HRGMv2_2832_25_7 | 8953 | 10044 | - | Lipase_GDSL_2 |
| pfam | HRGMv2_2832_25 | HRGMv2_2832_25_8 | 10034 | 10663 | - | Lipase_GDSL | Lipase_GDSL_2 |
| CAZyme | HRGMv2_2832_25 | HRGMv2_2832_25_9 | 10683 | 13742 | - | CBM32 | GH31_3 |
| CAZyme | HRGMv2_2832_25 | HRGMv2_2832_25_10 | 13758 | 16073 | - | GH31 |
| TC | HRGMv2_2832_25 | HRGMv2_2832_25_11 | 16045 | 16977 | - | 3.A.1.1.32 |
| TC | HRGMv2_2832_25 | HRGMv2_2832_25_12 | 16977 | 17822 | - | 3.A.1.1.45 |
| pfam | HRGMv2_2832_25 | HRGMv2_2832_25_13 | 17852 | 20125 | - | DUF5696 |
| CAZyme | HRGMv2_2832_25 | HRGMv2_2832_25_14 | 20188 | 25137 | - | GH31 |
| pfam | HRGMv2_2832_25 | HRGMv2_2832_25_15 | 25156 | 27189 | - | Yip1 |
| TC | HRGMv2_2832_25 | HRGMv2_2832_25_16 | 27206 | 28096 | - | 3.A.1.1.39 |
| TC | HRGMv2_2832_25 | HRGMv2_2832_25_17 | 28117 | 29010 | - | 3.A.1.1.34 |
Gene ID: HRGMv2_2832_25_4
Type: CAZyme
Location: 2977 - 5274 (-)
Type: CAZyme
Location: 2977 - 5274 (-)
Gene ID: HRGMv2_2832_25_5
Type: CAZyme
Location: 5293 - 7233 (-)
Type: CAZyme
Location: 5293 - 7233 (-)
Gene ID: HRGMv2_2832_25_6
Type: CAZyme
Location: 7267 - 8901 (-)
Type: CAZyme
Location: 7267 - 8901 (-)
Gene ID: HRGMv2_2832_25_7
Type: pfam
Location: 8953 - 10044 (-)
Type: pfam
Location: 8953 - 10044 (-)
Gene ID: HRGMv2_2832_25_8
Type: pfam
Location: 10034 - 10663 (-)
Type: pfam
Location: 10034 - 10663 (-)
Gene ID: HRGMv2_2832_25_9
Type: CAZyme
Location: 10683 - 13742 (-)
Type: CAZyme
Location: 10683 - 13742 (-)
Gene ID: HRGMv2_2832_25_10
Type: CAZyme
Location: 13758 - 16073 (-)
Type: CAZyme
Location: 13758 - 16073 (-)
Gene ID: HRGMv2_2832_25_11
Type: TC
Location: 16045 - 16977 (-)
Type: TC
Location: 16045 - 16977 (-)
Gene ID: HRGMv2_2832_25_12
Type: TC
Location: 16977 - 17822 (-)
Type: TC
Location: 16977 - 17822 (-)
Gene ID: HRGMv2_2832_25_13
Type: pfam
Location: 17852 - 20125 (-)
Type: pfam
Location: 17852 - 20125 (-)
Gene ID: HRGMv2_2832_25_14
Type: CAZyme
Location: 20188 - 25137 (-)
Type: CAZyme
Location: 20188 - 25137 (-)
Gene ID: HRGMv2_2832_25_15
Type: pfam
Location: 25156 - 27189 (-)
Type: pfam
Location: 25156 - 27189 (-)
Gene ID: HRGMv2_2832_25_16
Type: TC
Location: 27206 - 28096 (-)
Type: TC
Location: 27206 - 28096 (-)
Gene ID: HRGMv2_2832_25_17
Type: TC
Location: 28117 - 29010 (-)
Type: TC
Location: 28117 - 29010 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA737
Species
UBA737 sp905193585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2832_25_4 | vegetarian > vegan | 1.59565 | 0.00082 |
| HRGMv2_2832_25_5 | vegetarian > vegan | 1.26967 | 0.00082 |
| HRGMv2_2832_25_7 | vegetarian > vegan | 3.20436 | 0.00082 |
| HRGMv2_2832_25_8 | vegetarian > vegan | 2.63383 | 0.00082 |
| HRGMv2_2832_25_9 | vegetarian > vegan | 1.09318 | 0.00082 |
| HRGMv2_2832_25_10 | vegetarian > vegan | 1.49138 | 0.00082 |
| HRGMv2_2832_25_11 | vegetarian > vegan | 2.11440 | 0.00082 |
| HRGMv2_2832_25_12 | vegetarian > vegan | 2.04207 | 0.00082 |
| HRGMv2_2832_25_13 | vegetarian > vegan | 2.07659 | 0.00082 |
| HRGMv2_2832_25_14 | vegetarian > vegan | 2.39004 | 0.00082 |
| HRGMv2_2832_25_15 | vegetarian > vegan | 1.22055 | 0.00082 |
| HRGMv2_2832_25_16 | vegetarian > vegan | 3.18011 | 0.00082 |
| HRGMv2_2832_25_17 | vegetarian > vegan | 2.13455 | 0.00082 |