Cluster: HRGMv2_2832_CGC16
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2832
- CGC Family ID: CGCFAM_07657
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2832_24 | HRGMv2_2832_24_30 | 28461 | 29627 | + | 2.A.103.1.4 |
| pfam | HRGMv2_2832_24 | HRGMv2_2832_24_31 | 29731 | 30438 | + | ThuA |
| CAZyme | HRGMv2_2832_24 | HRGMv2_2832_24_32 | 30447 | 31493 | + | GH179 |
| pfam | HRGMv2_2832_24 | HRGMv2_2832_24_33 | 31493 | 32491 | + | GFO_IDH_MocA | GFO_IDH_MocA_C3 |
| pfam | HRGMv2_2832_24 | HRGMv2_2832_24_34 | 32488 | 33402 | + | AP_endonuc_2 |
| CAZyme | HRGMv2_2832_24 | HRGMv2_2832_24_35 | 33447 | 34601 | + | GH179 |
| pfam | HRGMv2_2832_24 | HRGMv2_2832_24_36 | 34648 | 35463 | + | AP_endonuc_2 |
| TC | HRGMv2_2832_24 | HRGMv2_2832_24_37 | 35573 | 37021 | - | 2.A.40.7.4 |
| TF | HRGMv2_2832_24 | HRGMv2_2832_24_38 | 37318 | 37905 | + | LexA_DNA_bind |
| pfam | HRGMv2_2832_24 | HRGMv2_2832_24_39 | 37915 | 38361 | + | RNase_H |
| TC | HRGMv2_2832_24 | HRGMv2_2832_24_40 | 38366 | 38902 | + | 2.A.88.9.1 |
Gene ID: HRGMv2_2832_24_30
Type: TC
Location: 28461 - 29627 (+)
Type: TC
Location: 28461 - 29627 (+)
Gene ID: HRGMv2_2832_24_31
Type: pfam
Location: 29731 - 30438 (+)
Type: pfam
Location: 29731 - 30438 (+)
Gene ID: HRGMv2_2832_24_32
Type: CAZyme
Location: 30447 - 31493 (+)
Type: CAZyme
Location: 30447 - 31493 (+)
Gene ID: HRGMv2_2832_24_33
Type: pfam
Location: 31493 - 32491 (+)
Type: pfam
Location: 31493 - 32491 (+)
Gene ID: HRGMv2_2832_24_34
Type: pfam
Location: 32488 - 33402 (+)
Type: pfam
Location: 32488 - 33402 (+)
Gene ID: HRGMv2_2832_24_35
Type: CAZyme
Location: 33447 - 34601 (+)
Type: CAZyme
Location: 33447 - 34601 (+)
Gene ID: HRGMv2_2832_24_36
Type: pfam
Location: 34648 - 35463 (+)
Type: pfam
Location: 34648 - 35463 (+)
Gene ID: HRGMv2_2832_24_37
Type: TC
Location: 35573 - 37021 (-)
Type: TC
Location: 35573 - 37021 (-)
Gene ID: HRGMv2_2832_24_38
Type: TF
Location: 37318 - 37905 (+)
Type: TF
Location: 37318 - 37905 (+)
Gene ID: HRGMv2_2832_24_39
Type: pfam
Location: 37915 - 38361 (+)
Type: pfam
Location: 37915 - 38361 (+)
Gene ID: HRGMv2_2832_24_40
Type: TC
Location: 38366 - 38902 (+)
Type: TC
Location: 38366 - 38902 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA737
Species
UBA737 sp905193585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2832_24_30 | vegetarian > vegan | 1.10736 | 0.00082 |
| HRGMv2_2832_24_33 | vegetarian > vegan | 1.26014 | 0.00082 |
| HRGMv2_2832_24_35 | vegetarian > vegan | 1.44926 | 0.00082 |
| HRGMv2_2832_24_36 | vegetarian > vegan | 2.77566 | 0.00082 |
| HRGMv2_2832_24_38 | vegetarian > vegan | 2.11991 | 0.00082 |