dbCAN Logo

Cluster: HRGMv2_2832_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2832_19 HRGMv2_2832_19_29 23538 25028 - GH77
TC HRGMv2_2832_19 HRGMv2_2832_19_30 25012 25842 - 3.A.1.1.45
TC HRGMv2_2832_19 HRGMv2_2832_19_31 25843 26688 - 3.A.1.1.45
TC HRGMv2_2832_19 HRGMv2_2832_19_32 26689 28026 - 3.A.1.1.45
Gene ID: HRGMv2_2832_19_29
Type: CAZyme
Location: 23538 - 25028 (-)
Gene ID: HRGMv2_2832_19_30
Type: TC
Location: 25012 - 25842 (-)
Gene ID: HRGMv2_2832_19_31
Type: TC
Location: 25843 - 26688 (-)
Gene ID: HRGMv2_2832_19_32
Type: TC
Location: 26689 - 28026 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2832_19_31 vegetarian > vegan 1.51795 0.00082

🧭 Explore Read Mapping of CGC

← Back to Cluster List