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Cluster: HRGMv2_2832_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2832_17 HRGMv2_2832_17_38 46678 47571 + 3.A.1.1.11
TC HRGMv2_2832_17 HRGMv2_2832_17_39 47576 48427 + 3.A.1.1.11
CAZyme HRGMv2_2832_17 HRGMv2_2832_17_40 48480 49448 + GH130
CAZyme HRGMv2_2832_17 HRGMv2_2832_17_41 49471 50430 + GH130
CAZyme HRGMv2_2832_17 HRGMv2_2832_17_42 50804 53521 + GH38
NULL(UNKNOWN) HRGMv2_2832_17 HRGMv2_2832_17_43 53633 53755 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2832_17 HRGMv2_2832_17_44 53803 58788 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2832_17 HRGMv2_2832_17_45 59027 60991 + GH92
Gene ID: HRGMv2_2832_17_38
Type: TC
Location: 46678 - 47571 (+)
Gene ID: HRGMv2_2832_17_39
Type: TC
Location: 47576 - 48427 (+)
Gene ID: HRGMv2_2832_17_40
Type: CAZyme
Location: 48480 - 49448 (+)
Gene ID: HRGMv2_2832_17_41
Type: CAZyme
Location: 49471 - 50430 (+)
Gene ID: HRGMv2_2832_17_42
Type: CAZyme
Location: 50804 - 53521 (+)
Gene ID: HRGMv2_2832_17_43
Type:
Location: 53633 - 53755 (+)
Gene ID: HRGMv2_2832_17_44
Type:
Location: 53803 - 58788 (+)
Gene ID: HRGMv2_2832_17_45
Type: CAZyme
Location: 59027 - 60991 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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