Cluster: HRGMv2_2832_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2832
- CGC Family ID: CGCFAM_00418
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2832_14 | HRGMv2_2832_14_27 | 28121 | 30280 | - | GT2 |
| TF | HRGMv2_2832_14 | HRGMv2_2832_14_28 | 30538 | 31161 | + | HTH_AraC | HTH_AraC |
| TC | HRGMv2_2832_14 | HRGMv2_2832_14_29 | 31142 | 32944 | - | 3.A.1.135.5 |
Gene ID: HRGMv2_2832_14_27
Type: CAZyme
Location: 28121 - 30280 (-)
Type: CAZyme
Location: 28121 - 30280 (-)
Gene ID: HRGMv2_2832_14_28
Type: TF
Location: 30538 - 31161 (+)
Type: TF
Location: 30538 - 31161 (+)
Gene ID: HRGMv2_2832_14_29
Type: TC
Location: 31142 - 32944 (-)
Type: TC
Location: 31142 - 32944 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA737
Species
UBA737 sp905193585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2832_14_27 | vegetarian > vegan | 1.25985 | 0.00082 |
| HRGMv2_2832_14_28 | vegetarian > vegan | 2.69635 | 0.00082 |
| HRGMv2_2832_14_29 | vegetarian > vegan | 1.38667 | 0.00082 |