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Cluster: HRGMv2_2832_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2832_1 HRGMv2_2832_1_60 61495 62607 - GT28
TC HRGMv2_2832_1 HRGMv2_2832_1_61 62627 63757 - 2.A.103.1.3
TC HRGMv2_2832_1 HRGMv2_2832_1_62 63775 64797 - 9.B.146.1.3
Gene ID: HRGMv2_2832_1_60
Type: CAZyme
Location: 61495 - 62607 (-)
Gene ID: HRGMv2_2832_1_61
Type: TC
Location: 62627 - 63757 (-)
Gene ID: HRGMv2_2832_1_62
Type: TC
Location: 63775 - 64797 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2832_1_62 vegetarian > vegan 2.54748 0.00082

🧭 Explore Read Mapping of CGC

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