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Cluster: HRGMv2_2827_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2827_38 HRGMv2_2827_38_1 62 880 - 3.A.1.15.5
TC HRGMv2_2827_38 HRGMv2_2827_38_2 877 1590 - 3.A.1.15.8
TC HRGMv2_2827_38 HRGMv2_2827_38_3 1590 2588 - 3.A.1.15.3
CAZyme HRGMv2_2827_38 HRGMv2_2827_38_4 2920 5337 - GT35
CAZyme HRGMv2_2827_38 HRGMv2_2827_38_5 5359 6786 - GT5
pfam HRGMv2_2827_38 HRGMv2_2827_38_6 6803 7915 - NTP_transferase | Hexapep_GlmU
pfam HRGMv2_2827_38 HRGMv2_2827_38_7 7912 9120 - NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_2827_38 HRGMv2_2827_38_8 9117 10994 - CBM48 | GH13_9
Gene ID: HRGMv2_2827_38_1
Type: TC
Location: 62 - 880 (-)
Gene ID: HRGMv2_2827_38_2
Type: TC
Location: 877 - 1590 (-)
Gene ID: HRGMv2_2827_38_3
Type: TC
Location: 1590 - 2588 (-)
Gene ID: HRGMv2_2827_38_4
Type: CAZyme
Location: 2920 - 5337 (-)
Gene ID: HRGMv2_2827_38_5
Type: CAZyme
Location: 5359 - 6786 (-)
Gene ID: HRGMv2_2827_38_6
Type: pfam
Location: 6803 - 7915 (-)
Gene ID: HRGMv2_2827_38_7
Type: pfam
Location: 7912 - 9120 (-)
Gene ID: HRGMv2_2827_38_8
Type: CAZyme
Location: 9117 - 10994 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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