Cluster: HRGMv2_2820_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2820
- CGC Family ID: CGCFAM_05356
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2820_2 | HRGMv2_2820_2_322 | 307206 | 309680 | + | GT35 |
| CAZyme | HRGMv2_2820_2 | HRGMv2_2820_2_323 | 309770 | 311620 | + | GH13_39 |
| pfam | HRGMv2_2820_2 | HRGMv2_2820_2_324 | 311860 | 313614 | + | tRNA-synt_2 | tRNA_anti-codon | GAD |
| pfam | HRGMv2_2820_2 | HRGMv2_2820_2_325 | 313686 | 313976 | + | GatC |
| TC | HRGMv2_2820_2 | HRGMv2_2820_2_326 | 313987 | 315453 | + | 3.A.9.1.1 |
Gene ID: HRGMv2_2820_2_322
Type: CAZyme
Location: 307206 - 309680 (+)
Type: CAZyme
Location: 307206 - 309680 (+)
Gene ID: HRGMv2_2820_2_323
Type: CAZyme
Location: 309770 - 311620 (+)
Type: CAZyme
Location: 309770 - 311620 (+)
Gene ID: HRGMv2_2820_2_324
Type: pfam
Location: 311860 - 313614 (+)
Type: pfam
Location: 311860 - 313614 (+)
Gene ID: HRGMv2_2820_2_325
Type: pfam
Location: 313686 - 313976 (+)
Type: pfam
Location: 313686 - 313976 (+)
Gene ID: HRGMv2_2820_2_326
Type: TC
Location: 313987 - 315453 (+)
Type: TC
Location: 313987 - 315453 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R faecale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.