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Cluster: HRGMv2_2820_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2820_2 HRGMv2_2820_2_200 197237 198214 + 3.A.1.34.1
TC HRGMv2_2820_2 HRGMv2_2820_2_201 198313 199221 + 3.A.1.34.1
TC HRGMv2_2820_2 HRGMv2_2820_2_202 199214 200011 + 3.A.1.34.1
TF HRGMv2_2820_2 HRGMv2_2820_2_203 200075 200767 - Trans_reg_C
STP HRGMv2_2820_2 HRGMv2_2820_2_204 200745 202301 - HATPase_c | HisKA
TC HRGMv2_2820_2 HRGMv2_2820_2_205 202512 203072 + 3.A.1.25.3
sulfatase HRGMv2_2820_2 HRGMv2_2820_2_206 203186 204019 + S1_2
TC HRGMv2_2820_2 HRGMv2_2820_2_207 204114 205580 + 2.A.2.1.1
CAZyme HRGMv2_2820_2 HRGMv2_2820_2_208 205762 207261 + GH51_1
Gene ID: HRGMv2_2820_2_200
Type: TC
Location: 197237 - 198214 (+)
Gene ID: HRGMv2_2820_2_201
Type: TC
Location: 198313 - 199221 (+)
Gene ID: HRGMv2_2820_2_202
Type: TC
Location: 199214 - 200011 (+)
Gene ID: HRGMv2_2820_2_203
Type: TF
Location: 200075 - 200767 (-)
Gene ID: HRGMv2_2820_2_204
Type: STP
Location: 200745 - 202301 (-)
Gene ID: HRGMv2_2820_2_205
Type: TC
Location: 202512 - 203072 (+)
Gene ID: HRGMv2_2820_2_206
Type: sulfatase
Location: 203186 - 204019 (+)
Gene ID: HRGMv2_2820_2_207
Type: TC
Location: 204114 - 205580 (+)
Gene ID: HRGMv2_2820_2_208
Type: CAZyme
Location: 205762 - 207261 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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