Cluster: HRGMv2_2820_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2820
- CGC Family ID: CGCFAM_01133
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2820_1 | HRGMv2_2820_1_138 | 149896 | 152397 | + | 3.A.3.5.15 |
| pfam | HRGMv2_2820_1 | HRGMv2_2820_1_139 | 152418 | 153116 | - | DUF3592 |
| peptidase | HRGMv2_2820_1 | HRGMv2_2820_1_140 | 153130 | 154197 | - | M24.UPB |
| CAZyme | HRGMv2_2820_1 | HRGMv2_2820_1_141 | 154312 | 155790 | + | GH51_1 |
Gene ID: HRGMv2_2820_1_138
Type: TC
Location: 149896 - 152397 (+)
Type: TC
Location: 149896 - 152397 (+)
Gene ID: HRGMv2_2820_1_139
Type: pfam
Location: 152418 - 153116 (-)
Type: pfam
Location: 152418 - 153116 (-)
Gene ID: HRGMv2_2820_1_140
Type: peptidase
Location: 153130 - 154197 (-)
Type: peptidase
Location: 153130 - 154197 (-)
Gene ID: HRGMv2_2820_1_141
Type: CAZyme
Location: 154312 - 155790 (+)
Type: CAZyme
Location: 154312 - 155790 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R faecale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.