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Cluster: HRGMv2_2820_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2820_1 HRGMv2_2820_1_125 131217 132794 + 2.A.2.3.6
pfam HRGMv2_2820_1 HRGMv2_2820_1_126 132787 134130 + Metallophos
CAZyme HRGMv2_2820_1 HRGMv2_2820_1_127 134188 137202 + GH2
CAZyme HRGMv2_2820_1 HRGMv2_2820_1_128 137208 138677 + GH18
NULL(UNKNOWN) HRGMv2_2820_1 HRGMv2_2820_1_129 138664 139335 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2820_1 HRGMv2_2820_1_130 139424 140278 - Collagen | Collagen | Collagen
TC HRGMv2_2820_1 HRGMv2_2820_1_131 140514 142247 + 3.A.1.135.5
TC HRGMv2_2820_1 HRGMv2_2820_1_132 142244 143989 + 3.A.1.135.5
TC HRGMv2_2820_1 HRGMv2_2820_1_133 144005 145405 + 2.A.25.1.3
Gene ID: HRGMv2_2820_1_125
Type: TC
Location: 131217 - 132794 (+)
Gene ID: HRGMv2_2820_1_126
Type: pfam
Location: 132787 - 134130 (+)
Gene ID: HRGMv2_2820_1_127
Type: CAZyme
Location: 134188 - 137202 (+)
Gene ID: HRGMv2_2820_1_128
Type: CAZyme
Location: 137208 - 138677 (+)
Gene ID: HRGMv2_2820_1_129
Type:
Location: 138664 - 139335 (+)
Gene ID: HRGMv2_2820_1_130
Type: pfam
Location: 139424 - 140278 (-)
Gene ID: HRGMv2_2820_1_131
Type: TC
Location: 140514 - 142247 (+)
Gene ID: HRGMv2_2820_1_132
Type: TC
Location: 142244 - 143989 (+)
Gene ID: HRGMv2_2820_1_133
Type: TC
Location: 144005 - 145405 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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