Cluster: HRGMv2_2820_CGC26
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2820
- CGC Family ID: CGCFAM_06811
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2820_10 | HRGMv2_2820_10_2 | 318 | 2714 | + | GH51_2 |
| pfam | HRGMv2_2820_10 | HRGMv2_2820_10_3 | 2715 | 3599 | + | Exo_endo_phos |
| TF | HRGMv2_2820_10 | HRGMv2_2820_10_4 | 4215 | 5015 | + | MerR |
| TC | HRGMv2_2820_10 | HRGMv2_2820_10_5 | 5012 | 5434 | + | 3.A.1.105.14 |
| NULL(UNKNOWN) | HRGMv2_2820_10 | HRGMv2_2820_10_6 | 5539 | 5826 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2820_10 | HRGMv2_2820_10_7 | 5823 | 6539 | + | ABC2_membrane |
| TC | HRGMv2_2820_10 | HRGMv2_2820_10_8 | 6750 | 7532 | + | 2.A.5.5.2 |
Gene ID: HRGMv2_2820_10_2
Type: CAZyme
Location: 318 - 2714 (+)
Type: CAZyme
Location: 318 - 2714 (+)
Gene ID: HRGMv2_2820_10_3
Type: pfam
Location: 2715 - 3599 (+)
Type: pfam
Location: 2715 - 3599 (+)
Gene ID: HRGMv2_2820_10_4
Type: TF
Location: 4215 - 5015 (+)
Type: TF
Location: 4215 - 5015 (+)
Gene ID: HRGMv2_2820_10_5
Type: TC
Location: 5012 - 5434 (+)
Type: TC
Location: 5012 - 5434 (+)
Gene ID: HRGMv2_2820_10_6
Type:
Location: 5539 - 5826 (+)
Type:
Location: 5539 - 5826 (+)
Gene ID: HRGMv2_2820_10_7
Type: pfam
Location: 5823 - 6539 (+)
Type: pfam
Location: 5823 - 6539 (+)
Gene ID: HRGMv2_2820_10_8
Type: TC
Location: 6750 - 7532 (+)
Type: TC
Location: 6750 - 7532 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R faecale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.