Cluster: HRGMv2_2820_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2820
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2820_8 | HRGMv2_2820_8_43 | 62086 | 63300 | + | 3.B.1.1.2 |
| pfam | HRGMv2_2820_8 | HRGMv2_2820_8_44 | 63458 | 65650 | + | UvrD-helicase | AAA_19 | UvrD_C | UvrD_C_2 | PcrA_UvrD_tudor |
| NULL(UNKNOWN) | HRGMv2_2820_8 | HRGMv2_2820_8_45 | 65722 | 66558 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2820_8 | HRGMv2_2820_8_46 | 66664 | 68181 | - | GH77 |
Gene ID: HRGMv2_2820_8_43
Type: TC
Location: 62086 - 63300 (+)
Type: TC
Location: 62086 - 63300 (+)
Gene ID: HRGMv2_2820_8_44
Type: pfam
Location: 63458 - 65650 (+)
Type: pfam
Location: 63458 - 65650 (+)
Gene ID: HRGMv2_2820_8_45
Type:
Location: 65722 - 66558 (-)
Type:
Location: 65722 - 66558 (-)
Gene ID: HRGMv2_2820_8_46
Type: CAZyme
Location: 66664 - 68181 (-)
Type: CAZyme
Location: 66664 - 68181 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R faecale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.