dbCAN Logo

Cluster: HRGMv2_2820_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2820_7 HRGMv2_2820_7_84 88031 89095 - GH18
STP HRGMv2_2820_7 HRGMv2_2820_7_85 89126 90358 - HD
pfam HRGMv2_2820_7 HRGMv2_2820_7_86 90363 91079 - RadC
TC HRGMv2_2820_7 HRGMv2_2820_7_87 91349 92707 + 2.A.22.5.3
STP HRGMv2_2820_7 HRGMv2_2820_7_88 92777 93034 - HMA
pfam HRGMv2_2820_7 HRGMv2_2820_7_89 93070 93624 - DUF3793
TC HRGMv2_2820_7 HRGMv2_2820_7_90 93959 95692 - 3.A.1.135.7
TC HRGMv2_2820_7 HRGMv2_2820_7_91 95689 97464 - 3.A.1.21.1
STP HRGMv2_2820_7 HRGMv2_2820_7_92 97550 98170 - TetR_N
CAZyme HRGMv2_2820_7 HRGMv2_2820_7_93 98301 99764 - GH29
pfam HRGMv2_2820_7 HRGMv2_2820_7_94 99780 102194 - GH123_N
TF HRGMv2_2820_7 HRGMv2_2820_7_95 102564 103400 + HTH_AraC
TC HRGMv2_2820_7 HRGMv2_2820_7_96 103610 104674 + 3.A.1.2.3
TC HRGMv2_2820_7 HRGMv2_2820_7_97 104693 106198 + 3.A.1.2.3
TC HRGMv2_2820_7 HRGMv2_2820_7_98 106211 107278 + 3.A.1.2.3
Gene ID: HRGMv2_2820_7_84
Type: CAZyme
Location: 88031 - 89095 (-)
Gene ID: HRGMv2_2820_7_85
Type: STP
Location: 89126 - 90358 (-)
Gene ID: HRGMv2_2820_7_86
Type: pfam
Location: 90363 - 91079 (-)
Gene ID: HRGMv2_2820_7_87
Type: TC
Location: 91349 - 92707 (+)
Gene ID: HRGMv2_2820_7_88
Type: STP
Location: 92777 - 93034 (-)
Gene ID: HRGMv2_2820_7_89
Type: pfam
Location: 93070 - 93624 (-)
Gene ID: HRGMv2_2820_7_90
Type: TC
Location: 93959 - 95692 (-)
Gene ID: HRGMv2_2820_7_91
Type: TC
Location: 95689 - 97464 (-)
Gene ID: HRGMv2_2820_7_92
Type: STP
Location: 97550 - 98170 (-)
Gene ID: HRGMv2_2820_7_93
Type: CAZyme
Location: 98301 - 99764 (-)
Gene ID: HRGMv2_2820_7_94
Type: pfam
Location: 99780 - 102194 (-)
Gene ID: HRGMv2_2820_7_95
Type: TF
Location: 102564 - 103400 (+)
Gene ID: HRGMv2_2820_7_96
Type: TC
Location: 103610 - 104674 (+)
Gene ID: HRGMv2_2820_7_97
Type: TC
Location: 104693 - 106198 (+)
Gene ID: HRGMv2_2820_7_98
Type: TC
Location: 106211 - 107278 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List