Cluster: HRGMv2_2820_CGC22
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_2820
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2820_7 | HRGMv2_2820_7_49 | 48846 | 51161 | + | GH89 |
| CAZyme | HRGMv2_2820_7 | HRGMv2_2820_7_50 | 51151 | 52902 | + | GH36 |
| CAZyme | HRGMv2_2820_7 | HRGMv2_2820_7_51 | 52907 | 54268 | + | GH29 |
| NULL(UNKNOWN) | HRGMv2_2820_7 | HRGMv2_2820_7_52 | 54388 | 54879 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2820_7 | HRGMv2_2820_7_53 | 54891 | 55325 | + | GH29 |
| CAZyme | HRGMv2_2820_7 | HRGMv2_2820_7_54 | 55319 | 55924 | + | GH29 |
| TC | HRGMv2_2820_7 | HRGMv2_2820_7_55 | 56130 | 57020 | + | 3.A.1.147.8 |
Gene ID: HRGMv2_2820_7_49
Type: CAZyme
Location: 48846 - 51161 (+)
Type: CAZyme
Location: 48846 - 51161 (+)
Gene ID: HRGMv2_2820_7_50
Type: CAZyme
Location: 51151 - 52902 (+)
Type: CAZyme
Location: 51151 - 52902 (+)
Gene ID: HRGMv2_2820_7_51
Type: CAZyme
Location: 52907 - 54268 (+)
Type: CAZyme
Location: 52907 - 54268 (+)
Gene ID: HRGMv2_2820_7_52
Type:
Location: 54388 - 54879 (+)
Type:
Location: 54388 - 54879 (+)
Gene ID: HRGMv2_2820_7_53
Type: CAZyme
Location: 54891 - 55325 (+)
Type: CAZyme
Location: 54891 - 55325 (+)
Gene ID: HRGMv2_2820_7_54
Type: CAZyme
Location: 55319 - 55924 (+)
Type: CAZyme
Location: 55319 - 55924 (+)
Gene ID: HRGMv2_2820_7_55
Type: TC
Location: 56130 - 57020 (+)
Type: TC
Location: 56130 - 57020 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R faecale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.