Cluster: HRGMv2_2820_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2820
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2820_1 | HRGMv2_2820_1_107 | 111615 | 114137 | + | 3.A.12.1.1 |
| TC | HRGMv2_2820_1 | HRGMv2_2820_1_108 | 114161 | 114619 | + | 3.A.11.1.1 |
| STP | HRGMv2_2820_1 | HRGMv2_2820_1_109 | 114616 | 115317 | + | Pribosyltran |
| pfam | HRGMv2_2820_1 | HRGMv2_2820_1_110 | 115328 | 115723 | + | YjbR |
| CAZyme | HRGMv2_2820_1 | HRGMv2_2820_1_111 | 115982 | 117502 | + | GH30_4 |
| CAZyme | HRGMv2_2820_1 | HRGMv2_2820_1_112 | 117515 | 119773 | + | GH2 |
Gene ID: HRGMv2_2820_1_107
Type: TC
Location: 111615 - 114137 (+)
Type: TC
Location: 111615 - 114137 (+)
Gene ID: HRGMv2_2820_1_108
Type: TC
Location: 114161 - 114619 (+)
Type: TC
Location: 114161 - 114619 (+)
Gene ID: HRGMv2_2820_1_109
Type: STP
Location: 114616 - 115317 (+)
Type: STP
Location: 114616 - 115317 (+)
Gene ID: HRGMv2_2820_1_110
Type: pfam
Location: 115328 - 115723 (+)
Type: pfam
Location: 115328 - 115723 (+)
Gene ID: HRGMv2_2820_1_111
Type: CAZyme
Location: 115982 - 117502 (+)
Type: CAZyme
Location: 115982 - 117502 (+)
Gene ID: HRGMv2_2820_1_112
Type: CAZyme
Location: 117515 - 119773 (+)
Type: CAZyme
Location: 117515 - 119773 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R faecale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.