Cluster: HRGMv2_2820_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2820
- CGC Family ID: CGCFAM_00050
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2820_6 | HRGMv2_2820_6_25 | 31866 | 32954 | - | GT4 |
| pfam | HRGMv2_2820_6 | HRGMv2_2820_6_26 | 32982 | 34157 | - | Radical_SAM | SPASM |
| CAZyme | HRGMv2_2820_6 | HRGMv2_2820_6_27 | 34206 | 35390 | - | GT4 |
| CAZyme | HRGMv2_2820_6 | HRGMv2_2820_6_28 | 35368 | 36525 | - | GT4 |
| TC | HRGMv2_2820_6 | HRGMv2_2820_6_29 | 36522 | 38018 | - | 9.B.18.1.2 |
| TC | HRGMv2_2820_6 | HRGMv2_2820_6_30 | 38065 | 38835 | - | 8.A.3.2.1 |
| TC | HRGMv2_2820_6 | HRGMv2_2820_6_31 | 38835 | 39605 | - | 8.A.3.2.3 |
Gene ID: HRGMv2_2820_6_25
Type: CAZyme
Location: 31866 - 32954 (-)
Type: CAZyme
Location: 31866 - 32954 (-)
Gene ID: HRGMv2_2820_6_26
Type: pfam
Location: 32982 - 34157 (-)
Type: pfam
Location: 32982 - 34157 (-)
Gene ID: HRGMv2_2820_6_27
Type: CAZyme
Location: 34206 - 35390 (-)
Type: CAZyme
Location: 34206 - 35390 (-)
Gene ID: HRGMv2_2820_6_28
Type: CAZyme
Location: 35368 - 36525 (-)
Type: CAZyme
Location: 35368 - 36525 (-)
Gene ID: HRGMv2_2820_6_29
Type: TC
Location: 36522 - 38018 (-)
Type: TC
Location: 36522 - 38018 (-)
Gene ID: HRGMv2_2820_6_30
Type: TC
Location: 38065 - 38835 (-)
Type: TC
Location: 38065 - 38835 (-)
Gene ID: HRGMv2_2820_6_31
Type: TC
Location: 38835 - 39605 (-)
Type: TC
Location: 38835 - 39605 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R faecale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.