Cluster: HRGMv2_2820_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2820
- CGC Family ID: CGCFAM_01581
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2820_5 | HRGMv2_2820_5_129 | 123259 | 124602 | - | GH33 |
| pfam | HRGMv2_2820_5 | HRGMv2_2820_5_130 | 124774 | 125979 | + | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| TC | HRGMv2_2820_5 | HRGMv2_2820_5_131 | 126201 | 127748 | + | 2.A.2.1.1 |
| TF | HRGMv2_2820_5 | HRGMv2_2820_5_132 | 127865 | 128443 | + | HTH_3 |
| sulfatase | HRGMv2_2820_5 | HRGMv2_2820_5_133 | 128451 | 129770 | - | S1_65 |
| TC | HRGMv2_2820_5 | HRGMv2_2820_5_134 | 129776 | 130852 | - | 1.A.23.4.1 |
Gene ID: HRGMv2_2820_5_129
Type: CAZyme
Location: 123259 - 124602 (-)
Type: CAZyme
Location: 123259 - 124602 (-)
Gene ID: HRGMv2_2820_5_130
Type: pfam
Location: 124774 - 125979 (+)
Type: pfam
Location: 124774 - 125979 (+)
Gene ID: HRGMv2_2820_5_131
Type: TC
Location: 126201 - 127748 (+)
Type: TC
Location: 126201 - 127748 (+)
Gene ID: HRGMv2_2820_5_132
Type: TF
Location: 127865 - 128443 (+)
Type: TF
Location: 127865 - 128443 (+)
Gene ID: HRGMv2_2820_5_133
Type: sulfatase
Location: 128451 - 129770 (-)
Type: sulfatase
Location: 128451 - 129770 (-)
Gene ID: HRGMv2_2820_5_134
Type: TC
Location: 129776 - 130852 (-)
Type: TC
Location: 129776 - 130852 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R faecale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.