Cluster: HRGMv2_2820_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2820
- CGC Family ID: CGCFAM_01134
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2820_5 | HRGMv2_2820_5_71 | 76870 | 78291 | - | GH30_4 |
| pfam | HRGMv2_2820_5 | HRGMv2_2820_5_72 | 78341 | 78763 | - | Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10 |
| TC | HRGMv2_2820_5 | HRGMv2_2820_5_73 | 78890 | 79747 | + | 3.A.1.3.2 |
| TC | HRGMv2_2820_5 | HRGMv2_2820_5_74 | 79832 | 80542 | + | 3.A.1.3.20 |
| TC | HRGMv2_2820_5 | HRGMv2_2820_5_75 | 80526 | 81248 | + | 3.A.1.3.25 |
Gene ID: HRGMv2_2820_5_71
Type: CAZyme
Location: 76870 - 78291 (-)
Type: CAZyme
Location: 76870 - 78291 (-)
Gene ID: HRGMv2_2820_5_72
Type: pfam
Location: 78341 - 78763 (-)
Type: pfam
Location: 78341 - 78763 (-)
Gene ID: HRGMv2_2820_5_73
Type: TC
Location: 78890 - 79747 (+)
Type: TC
Location: 78890 - 79747 (+)
Gene ID: HRGMv2_2820_5_74
Type: TC
Location: 79832 - 80542 (+)
Type: TC
Location: 79832 - 80542 (+)
Gene ID: HRGMv2_2820_5_75
Type: TC
Location: 80526 - 81248 (+)
Type: TC
Location: 80526 - 81248 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R faecale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.