Cluster: HRGMv2_2820_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate: galactan
- Genome ID: HRGMv2_2820
- CGC Family ID: CGCFAM_00078
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2820_5 | HRGMv2_2820_5_42 | 46751 | 48217 | + | 2.A.2.3.2 |
| CAZyme | HRGMv2_2820_5 | HRGMv2_2820_5_43 | 48254 | 49888 | + | GH2 |
| pfam | HRGMv2_2820_5 | HRGMv2_2820_5_44 | 50025 | 51107 | - | DUF4236 |
| CAZyme | HRGMv2_2820_5 | HRGMv2_2820_5_45 | 51592 | 53145 | + | GH28 |
Gene ID: HRGMv2_2820_5_42
Type: TC
Location: 46751 - 48217 (+)
Type: TC
Location: 46751 - 48217 (+)
Gene ID: HRGMv2_2820_5_43
Type: CAZyme
Location: 48254 - 49888 (+)
Type: CAZyme
Location: 48254 - 49888 (+)
Gene ID: HRGMv2_2820_5_44
Type: pfam
Location: 50025 - 51107 (-)
Type: pfam
Location: 50025 - 51107 (-)
Gene ID: HRGMv2_2820_5_45
Type: CAZyme
Location: 51592 - 53145 (+)
Type: CAZyme
Location: 51592 - 53145 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R faecale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.