Cluster: HRGMv2_2820_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2820
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2820_4 | HRGMv2_2820_4_159 | 171815 | 172945 | + | GT2 |
| pfam | HRGMv2_2820_4 | HRGMv2_2820_4_160 | 172960 | 174072 | + | GLF | NAD_binding_8 |
| CAZyme | HRGMv2_2820_4 | HRGMv2_2820_4_161 | 174117 | 175280 | + | GT2 |
| CAZyme | HRGMv2_2820_4 | HRGMv2_2820_4_162 | 175277 | 176242 | + | GT2 |
| TC | HRGMv2_2820_4 | HRGMv2_2820_4_163 | 176319 | 176966 | - | 2.A.38.4.3 |
| TC | HRGMv2_2820_4 | HRGMv2_2820_4_164 | 176994 | 178274 | - | 2.A.38.4.1 |
Gene ID: HRGMv2_2820_4_159
Type: CAZyme
Location: 171815 - 172945 (+)
Type: CAZyme
Location: 171815 - 172945 (+)
Gene ID: HRGMv2_2820_4_160
Type: pfam
Location: 172960 - 174072 (+)
Type: pfam
Location: 172960 - 174072 (+)
Gene ID: HRGMv2_2820_4_161
Type: CAZyme
Location: 174117 - 175280 (+)
Type: CAZyme
Location: 174117 - 175280 (+)
Gene ID: HRGMv2_2820_4_162
Type: CAZyme
Location: 175277 - 176242 (+)
Type: CAZyme
Location: 175277 - 176242 (+)
Gene ID: HRGMv2_2820_4_163
Type: TC
Location: 176319 - 176966 (-)
Type: TC
Location: 176319 - 176966 (-)
Gene ID: HRGMv2_2820_4_164
Type: TC
Location: 176994 - 178274 (-)
Type: TC
Location: 176994 - 178274 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R faecale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.