Cluster: HRGMv2_2820_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2820
- CGC Family ID: CGCFAM_04477
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2820_4 | HRGMv2_2820_4_29 | 33617 | 34831 | - | 9.B.10.1.1 |
| CAZyme | HRGMv2_2820_4 | HRGMv2_2820_4_30 | 34886 | 37336 | - | GH3 |
| pfam | HRGMv2_2820_4 | HRGMv2_2820_4_31 | 37553 | 38173 | - | Hexapep |
| NULL(UNKNOWN) | HRGMv2_2820_4 | HRGMv2_2820_4_32 | 38380 | 38643 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2820_4 | HRGMv2_2820_4_33 | 38877 | 40553 | - | 4.C.1.1.7 |
Gene ID: HRGMv2_2820_4_29
Type: TC
Location: 33617 - 34831 (-)
Type: TC
Location: 33617 - 34831 (-)
Gene ID: HRGMv2_2820_4_30
Type: CAZyme
Location: 34886 - 37336 (-)
Type: CAZyme
Location: 34886 - 37336 (-)
Gene ID: HRGMv2_2820_4_31
Type: pfam
Location: 37553 - 38173 (-)
Type: pfam
Location: 37553 - 38173 (-)
Gene ID: HRGMv2_2820_4_32
Type:
Location: 38380 - 38643 (-)
Type:
Location: 38380 - 38643 (-)
Gene ID: HRGMv2_2820_4_33
Type: TC
Location: 38877 - 40553 (-)
Type: TC
Location: 38877 - 40553 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R faecale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.