Cluster: HRGMv2_2820_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2820
- CGC Family ID: CGCFAM_06821
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2820_4 | HRGMv2_2820_4_15 | 13190 | 14521 | - | 2.A.66.1.26 |
| NULL(UNKNOWN) | HRGMv2_2820_4 | HRGMv2_2820_4_16 | 14854 | 15450 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2820_4 | HRGMv2_2820_4_17 | 15537 | 18308 | + | 3.A.5.1.3 |
| TC | HRGMv2_2820_4 | HRGMv2_2820_4_18 | 18561 | 21197 | - | 4.A.2.1.17 |
| pfam | HRGMv2_2820_4 | HRGMv2_2820_4_19 | 21423 | 22805 | + | Hexapep | Hexapep | NTP_transferase | NTP_transf_3 |
| CAZyme | HRGMv2_2820_4 | HRGMv2_2820_4_20 | 22873 | 26139 | - | GH25 |
| CAZyme | HRGMv2_2820_4 | HRGMv2_2820_4_21 | 26180 | 26977 | - | GH25 |
Gene ID: HRGMv2_2820_4_15
Type: TC
Location: 13190 - 14521 (-)
Type: TC
Location: 13190 - 14521 (-)
Gene ID: HRGMv2_2820_4_16
Type:
Location: 14854 - 15450 (+)
Type:
Location: 14854 - 15450 (+)
Gene ID: HRGMv2_2820_4_17
Type: TC
Location: 15537 - 18308 (+)
Type: TC
Location: 15537 - 18308 (+)
Gene ID: HRGMv2_2820_4_18
Type: TC
Location: 18561 - 21197 (-)
Type: TC
Location: 18561 - 21197 (-)
Gene ID: HRGMv2_2820_4_19
Type: pfam
Location: 21423 - 22805 (+)
Type: pfam
Location: 21423 - 22805 (+)
Gene ID: HRGMv2_2820_4_20
Type: CAZyme
Location: 22873 - 26139 (-)
Type: CAZyme
Location: 22873 - 26139 (-)
Gene ID: HRGMv2_2820_4_21
Type: CAZyme
Location: 26180 - 26977 (-)
Type: CAZyme
Location: 26180 - 26977 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R faecale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.