Cluster: HRGMv2_2816_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2816
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2816_8 | HRGMv2_2816_8_7 | 5934 | 7031 | - | GT4 |
| TC | HRGMv2_2816_8 | HRGMv2_2816_8_8 | 7028 | 7645 | - | 9.B.18.1.1 |
| NULL(UNKNOWN) | HRGMv2_2816_8 | HRGMv2_2816_8_9 | 7830 | 8378 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2816_8 | HRGMv2_2816_8_10 | 8375 | 10603 | + | Resolvase | Recombinase | Zn_ribbon_recom | SpoVT_C |
| TC | HRGMv2_2816_8 | HRGMv2_2816_8_11 | 10649 | 10912 | - | 8.A.8.1.4 |
Gene ID: HRGMv2_2816_8_7
Type: CAZyme
Location: 5934 - 7031 (-)
Type: CAZyme
Location: 5934 - 7031 (-)
Gene ID: HRGMv2_2816_8_8
Type: TC
Location: 7028 - 7645 (-)
Type: TC
Location: 7028 - 7645 (-)
Gene ID: HRGMv2_2816_8_9
Type:
Location: 7830 - 8378 (+)
Type:
Location: 7830 - 8378 (+)
Gene ID: HRGMv2_2816_8_10
Type: pfam
Location: 8375 - 10603 (+)
Type: pfam
Location: 8375 - 10603 (+)
Gene ID: HRGMv2_2816_8_11
Type: TC
Location: 10649 - 10912 (-)
Type: TC
Location: 10649 - 10912 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp000435975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.