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Cluster: HRGMv2_2816_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2816_6 HRGMv2_2816_6_32 32052 32936 + 2.A.7.3.47
pfam HRGMv2_2816_6 HRGMv2_2816_6_33 32950 34782 + Radical_SAM | Radical_SAM_N2
pfam HRGMv2_2816_6 HRGMv2_2816_6_34 34775 35437 + DUF2344
CAZyme HRGMv2_2816_6 HRGMv2_2816_6_35 35651 37492 + CBM48 | GH13_9
pfam HRGMv2_2816_6 HRGMv2_2816_6_36 37520 38731 + NTP_transferase | Hexapep_GlmU
pfam HRGMv2_2816_6 HRGMv2_2816_6_37 38728 39834 + NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_2816_6 HRGMv2_2816_6_38 39850 41274 + GT5
CAZyme HRGMv2_2816_6 HRGMv2_2816_6_39 41275 43695 + GT35
TC HRGMv2_2816_6 HRGMv2_2816_6_40 43758 44441 - 9.B.143.2.3
Gene ID: HRGMv2_2816_6_32
Type: TC
Location: 32052 - 32936 (+)
Gene ID: HRGMv2_2816_6_33
Type: pfam
Location: 32950 - 34782 (+)
Gene ID: HRGMv2_2816_6_34
Type: pfam
Location: 34775 - 35437 (+)
Gene ID: HRGMv2_2816_6_35
Type: CAZyme
Location: 35651 - 37492 (+)
Gene ID: HRGMv2_2816_6_36
Type: pfam
Location: 37520 - 38731 (+)
Gene ID: HRGMv2_2816_6_37
Type: pfam
Location: 38728 - 39834 (+)
Gene ID: HRGMv2_2816_6_38
Type: CAZyme
Location: 39850 - 41274 (+)
Gene ID: HRGMv2_2816_6_39
Type: CAZyme
Location: 41275 - 43695 (+)
Gene ID: HRGMv2_2816_6_40
Type: TC
Location: 43758 - 44441 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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