Cluster: HRGMv2_2816_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2816
- CGC Family ID: CGCFAM_00005
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2816_1 | HRGMv2_2816_1_190 | 203443 | 204009 | + | 9.B.18.1.3 |
| CAZyme | HRGMv2_2816_1 | HRGMv2_2816_1_191 | 204015 | 205145 | + | GT4 |
| pfam | HRGMv2_2816_1 | HRGMv2_2816_1_192 | 205135 | 206064 | + | ATPgrasp_TupA |
| CAZyme | HRGMv2_2816_1 | HRGMv2_2816_1_193 | 206061 | 207215 | + | GT4 |
| NULL(UNKNOWN) | HRGMv2_2816_1 | HRGMv2_2816_1_194 | 207212 | 208471 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2816_1 | HRGMv2_2816_1_195 | 208477 | 209604 | + | GT4 |
Gene ID: HRGMv2_2816_1_190
Type: TC
Location: 203443 - 204009 (+)
Type: TC
Location: 203443 - 204009 (+)
Gene ID: HRGMv2_2816_1_191
Type: CAZyme
Location: 204015 - 205145 (+)
Type: CAZyme
Location: 204015 - 205145 (+)
Gene ID: HRGMv2_2816_1_192
Type: pfam
Location: 205135 - 206064 (+)
Type: pfam
Location: 205135 - 206064 (+)
Gene ID: HRGMv2_2816_1_193
Type: CAZyme
Location: 206061 - 207215 (+)
Type: CAZyme
Location: 206061 - 207215 (+)
Gene ID: HRGMv2_2816_1_194
Type:
Location: 207212 - 208471 (+)
Type:
Location: 207212 - 208471 (+)
Gene ID: HRGMv2_2816_1_195
Type: CAZyme
Location: 208477 - 209604 (+)
Type: CAZyme
Location: 208477 - 209604 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp000435975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.