Cluster: HRGMv2_2816_CGC15
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2816
- CGC Family ID: CGCFAM_02904
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2816_22 | HRGMv2_2816_22_4 | 3144 | 4529 | - | 2.A.3.7.7 |
| pfam | HRGMv2_2816_22 | HRGMv2_2816_22_5 | 4531 | 5541 | - | OTCace | OTCace_N |
| CAZyme | HRGMv2_2816_22 | HRGMv2_2816_22_6 | 5831 | 10924 | + | GH20 |
Gene ID: HRGMv2_2816_22_4
Type: TC
Location: 3144 - 4529 (-)
Type: TC
Location: 3144 - 4529 (-)
Gene ID: HRGMv2_2816_22_5
Type: pfam
Location: 4531 - 5541 (-)
Type: pfam
Location: 4531 - 5541 (-)
Gene ID: HRGMv2_2816_22_6
Type: CAZyme
Location: 5831 - 10924 (+)
Type: CAZyme
Location: 5831 - 10924 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp000435975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2816_22_5 | vegetarian > omnivore | 1.17188 | 0.01786 |