Cluster: HRGMv2_2816_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2816
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2816_9 | HRGMv2_2816_9_47 | 48596 | 50425 | - | 3.A.1.106.2 |
| TC | HRGMv2_2816_9 | HRGMv2_2816_9_48 | 50556 | 51722 | - | 3.A.1.1.22 |
| pfam | HRGMv2_2816_9 | HRGMv2_2816_9_49 | 52178 | 54853 | + | Collagen |
| pfam | HRGMv2_2816_9 | HRGMv2_2816_9_50 | 55116 | 55574 | + | CrtO |
| CAZyme | HRGMv2_2816_9 | HRGMv2_2816_9_51 | 55571 | 56677 | + | GT28 |
Gene ID: HRGMv2_2816_9_47
Type: TC
Location: 48596 - 50425 (-)
Type: TC
Location: 48596 - 50425 (-)
Gene ID: HRGMv2_2816_9_48
Type: TC
Location: 50556 - 51722 (-)
Type: TC
Location: 50556 - 51722 (-)
Gene ID: HRGMv2_2816_9_49
Type: pfam
Location: 52178 - 54853 (+)
Type: pfam
Location: 52178 - 54853 (+)
Gene ID: HRGMv2_2816_9_50
Type: pfam
Location: 55116 - 55574 (+)
Type: pfam
Location: 55116 - 55574 (+)
Gene ID: HRGMv2_2816_9_51
Type: CAZyme
Location: 55571 - 56677 (+)
Type: CAZyme
Location: 55571 - 56677 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp000435975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.