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Cluster: HRGMv2_2814_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2814_4 HRGMv2_2814_4_19 18568 19530 + GT2
pfam HRGMv2_2814_4 HRGMv2_2814_4_20 19606 20196 - Hexapep | Mac | Hexapep_2 | Hexapep_2
pfam HRGMv2_2814_4 HRGMv2_2814_4_21 20200 20904 - DNA_alkylation
TC HRGMv2_2814_4 HRGMv2_2814_4_22 20901 22622 - 8.A.7.1.1
STP HRGMv2_2814_4 HRGMv2_2814_4_23 23050 23316 - PTS-HPr
TC HRGMv2_2814_4 HRGMv2_2814_4_24 23363 25342 - 4.A.2.1.4
TC HRGMv2_2814_4 HRGMv2_2814_4_25 25651 28317 + 3.A.3.2.21
TC HRGMv2_2814_4 HRGMv2_2814_4_26 28743 30974 + 3.A.1.135.7
TC HRGMv2_2814_4 HRGMv2_2814_4_27 30971 32857 + 3.A.1.135.6
Gene ID: HRGMv2_2814_4_19
Type: CAZyme
Location: 18568 - 19530 (+)
Gene ID: HRGMv2_2814_4_20
Type: pfam
Location: 19606 - 20196 (-)
Gene ID: HRGMv2_2814_4_21
Type: pfam
Location: 20200 - 20904 (-)
Gene ID: HRGMv2_2814_4_22
Type: TC
Location: 20901 - 22622 (-)
Gene ID: HRGMv2_2814_4_23
Type: STP
Location: 23050 - 23316 (-)
Gene ID: HRGMv2_2814_4_24
Type: TC
Location: 23363 - 25342 (-)
Gene ID: HRGMv2_2814_4_25
Type: TC
Location: 25651 - 28317 (+)
Gene ID: HRGMv2_2814_4_26
Type: TC
Location: 28743 - 30974 (+)
Gene ID: HRGMv2_2814_4_27
Type: TC
Location: 30971 - 32857 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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