Cluster: HRGMv2_2814_CGC19
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2814
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2814_39 | HRGMv2_2814_39_8 | 6738 | 8021 | - | GH13 |
| pfam | HRGMv2_2814_39 | HRGMv2_2814_39_9 | 8133 | 8780 | - | Spore_YunB |
| TC | HRGMv2_2814_39 | HRGMv2_2814_39_10 | 9222 | 9827 | - | 2.A.107.1.2 |
Gene ID: HRGMv2_2814_39_8
Type: CAZyme
Location: 6738 - 8021 (-)
Type: CAZyme
Location: 6738 - 8021 (-)
Gene ID: HRGMv2_2814_39_9
Type: pfam
Location: 8133 - 8780 (-)
Type: pfam
Location: 8133 - 8780 (-)
Gene ID: HRGMv2_2814_39_10
Type: TC
Location: 9222 - 9827 (-)
Type: TC
Location: 9222 - 9827 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Pseudoruminococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.