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Cluster: HRGMv2_2814_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2814_36 HRGMv2_2814_36_7 7381 8163 + 3.A.1.103.6
TC HRGMv2_2814_36 HRGMv2_2814_36_8 8179 8967 + 3.A.1.103.5
CAZyme HRGMv2_2814_36 HRGMv2_2814_36_9 8954 10084 + GT4
pfam HRGMv2_2814_36 HRGMv2_2814_36_10 10098 11396 + Big_2 | Big_2 | Big_2 | Big-like
TC HRGMv2_2814_36 HRGMv2_2814_36_11 11436 12833 + 9.B.18.1.1
pfam HRGMv2_2814_36 HRGMv2_2814_36_12 12848 13972 + EpsG
pfam HRGMv2_2814_36 HRGMv2_2814_36_13 14118 14372 + Gram_pos_anchor
CAZyme HRGMv2_2814_36 HRGMv2_2814_36_14 14523 15410 + GT111
Gene ID: HRGMv2_2814_36_7
Type: TC
Location: 7381 - 8163 (+)
Gene ID: HRGMv2_2814_36_8
Type: TC
Location: 8179 - 8967 (+)
Gene ID: HRGMv2_2814_36_9
Type: CAZyme
Location: 8954 - 10084 (+)
Gene ID: HRGMv2_2814_36_10
Type: pfam
Location: 10098 - 11396 (+)
Gene ID: HRGMv2_2814_36_11
Type: TC
Location: 11436 - 12833 (+)
Gene ID: HRGMv2_2814_36_12
Type: pfam
Location: 12848 - 13972 (+)
Gene ID: HRGMv2_2814_36_13
Type: pfam
Location: 14118 - 14372 (+)
Gene ID: HRGMv2_2814_36_14
Type: CAZyme
Location: 14523 - 15410 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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