Cluster: HRGMv2_2814_CGC17
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2814
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2814_26 | HRGMv2_2814_26_19 | 17660 | 18346 | + | 9.B.18.1.3 |
| pfam | HRGMv2_2814_26 | HRGMv2_2814_26_20 | 18371 | 19993 | + | Wzy_C |
| CAZyme | HRGMv2_2814_26 | HRGMv2_2814_26_21 | 19998 | 20735 | + | GH25 |
Gene ID: HRGMv2_2814_26_19
Type: TC
Location: 17660 - 18346 (+)
Type: TC
Location: 17660 - 18346 (+)
Gene ID: HRGMv2_2814_26_20
Type: pfam
Location: 18371 - 19993 (+)
Type: pfam
Location: 18371 - 19993 (+)
Gene ID: HRGMv2_2814_26_21
Type: CAZyme
Location: 19998 - 20735 (+)
Type: CAZyme
Location: 19998 - 20735 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Pseudoruminococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.