Cluster: HRGMv2_2814_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2814
- CGC Family ID: CGCFAM_00328
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2814_12 | HRGMv2_2814_12_24 | 28318 | 28803 | + | 9.B.105.1.5 |
| pfam | HRGMv2_2814_12 | HRGMv2_2814_12_25 | 28796 | 29710 | + | PseudoU_synth_2 | S4 |
| CAZyme | HRGMv2_2814_12 | HRGMv2_2814_12_26 | 30233 | 32863 | + | GH24 |
Gene ID: HRGMv2_2814_12_24
Type: TC
Location: 28318 - 28803 (+)
Type: TC
Location: 28318 - 28803 (+)
Gene ID: HRGMv2_2814_12_25
Type: pfam
Location: 28796 - 29710 (+)
Type: pfam
Location: 28796 - 29710 (+)
Gene ID: HRGMv2_2814_12_26
Type: CAZyme
Location: 30233 - 32863 (+)
Type: CAZyme
Location: 30233 - 32863 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Pseudoruminococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.