Cluster: HRGMv2_2814_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2814
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2814_11 | HRGMv2_2814_11_58 | 61580 | 62917 | + | 2.A.66.1.32 |
| peptidase | HRGMv2_2814_11 | HRGMv2_2814_11_59 | 62923 | 64761 | - | C44.UPW |
| CAZyme | HRGMv2_2814_11 | HRGMv2_2814_11_60 | 65166 | 66458 | + | GH3 |
Gene ID: HRGMv2_2814_11_58
Type: TC
Location: 61580 - 62917 (+)
Type: TC
Location: 61580 - 62917 (+)
Gene ID: HRGMv2_2814_11_59
Type: peptidase
Location: 62923 - 64761 (-)
Type: peptidase
Location: 62923 - 64761 (-)
Gene ID: HRGMv2_2814_11_60
Type: CAZyme
Location: 65166 - 66458 (+)
Type: CAZyme
Location: 65166 - 66458 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Pseudoruminococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.