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Cluster: HRGMv2_2813_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2813_15 HRGMv2_2813_15_3 2965 3864 - GT111
pfam HRGMv2_2813_15 HRGMv2_2813_15_4 3997 4251 - Gram_pos_anchor
pfam HRGMv2_2813_15 HRGMv2_2813_15_5 4395 5519 - EpsG
TC HRGMv2_2813_15 HRGMv2_2813_15_6 5534 6931 - 9.B.18.1.1
pfam HRGMv2_2813_15 HRGMv2_2813_15_7 6971 8269 - Big_2 | Big_2 | fn3_3
CAZyme HRGMv2_2813_15 HRGMv2_2813_15_8 8283 9413 - GT4
TC HRGMv2_2813_15 HRGMv2_2813_15_9 9400 10188 - 3.A.1.103.5
TC HRGMv2_2813_15 HRGMv2_2813_15_10 10204 10986 - 3.A.1.103.6
Gene ID: HRGMv2_2813_15_3
Type: CAZyme
Location: 2965 - 3864 (-)
Gene ID: HRGMv2_2813_15_4
Type: pfam
Location: 3997 - 4251 (-)
Gene ID: HRGMv2_2813_15_5
Type: pfam
Location: 4395 - 5519 (-)
Gene ID: HRGMv2_2813_15_6
Type: TC
Location: 5534 - 6931 (-)
Gene ID: HRGMv2_2813_15_7
Type: pfam
Location: 6971 - 8269 (-)
Gene ID: HRGMv2_2813_15_8
Type: CAZyme
Location: 8283 - 9413 (-)
Gene ID: HRGMv2_2813_15_9
Type: TC
Location: 9400 - 10188 (-)
Gene ID: HRGMv2_2813_15_10
Type: TC
Location: 10204 - 10986 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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