Cluster: HRGMv2_2813_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2813
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2813_13 | HRGMv2_2813_13_35 | 39089 | 40225 | - | GT28 |
| TC | HRGMv2_2813_13 | HRGMv2_2813_13_36 | 40402 | 41631 | - | 2.A.103.1.3 |
| TC | HRGMv2_2813_13 | HRGMv2_2813_13_37 | 41666 | 42676 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_2813_13_35
Type: CAZyme
Location: 39089 - 40225 (-)
Type: CAZyme
Location: 39089 - 40225 (-)
Gene ID: HRGMv2_2813_13_36
Type: TC
Location: 40402 - 41631 (-)
Type: TC
Location: 40402 - 41631 (-)
Gene ID: HRGMv2_2813_13_37
Type: TC
Location: 41666 - 42676 (-)
Type: TC
Location: 41666 - 42676 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Pseudoruminococcus
Species
Pseudoruminococcus sp902765855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.