Cluster: HRGMv2_2813_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2813
- CGC Family ID: CGCFAM_01640
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2813_7 | HRGMv2_2813_7_77 | 83214 | 83807 | + | 4.F.1.1.7 |
| pfam | HRGMv2_2813_7 | HRGMv2_2813_7_78 | 83920 | 86742 | + | MORN | MORN | MORN | MORN | MORN | MORN | MORN | MORN | MORN | MORN | MORN | MORN | MORN | MORN | MORN | MORN |
| CAZyme | HRGMv2_2813_7 | HRGMv2_2813_7_79 | 87444 | 88250 | + | CE4 |
Gene ID: HRGMv2_2813_7_77
Type: TC
Location: 83214 - 83807 (+)
Type: TC
Location: 83214 - 83807 (+)
Gene ID: HRGMv2_2813_7_78
Type: pfam
Location: 83920 - 86742 (+)
Type: pfam
Location: 83920 - 86742 (+)
Gene ID: HRGMv2_2813_7_79
Type: CAZyme
Location: 87444 - 88250 (+)
Type: CAZyme
Location: 87444 - 88250 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Pseudoruminococcus
Species
Pseudoruminococcus sp902765855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.