Cluster: HRGMv2_2813_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2813
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2813_7 | HRGMv2_2813_7_64 | 69470 | 70075 | + | 2.A.107.1.2 |
| pfam | HRGMv2_2813_7 | HRGMv2_2813_7_65 | 70723 | 71370 | + | Spore_YunB |
| CAZyme | HRGMv2_2813_7 | HRGMv2_2813_7_66 | 71482 | 72765 | + | GH13 |
Gene ID: HRGMv2_2813_7_64
Type: TC
Location: 69470 - 70075 (+)
Type: TC
Location: 69470 - 70075 (+)
Gene ID: HRGMv2_2813_7_65
Type: pfam
Location: 70723 - 71370 (+)
Type: pfam
Location: 70723 - 71370 (+)
Gene ID: HRGMv2_2813_7_66
Type: CAZyme
Location: 71482 - 72765 (+)
Type: CAZyme
Location: 71482 - 72765 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Pseudoruminococcus
Species
Pseudoruminococcus sp902765855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.