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Cluster: HRGMv2_2813_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2813_47 HRGMv2_2813_47_1 89 952 - 8.A.21.2.3
CAZyme HRGMv2_2813_47 HRGMv2_2813_47_2 1163 4783 - CBM26 | GH13_28
pfam HRGMv2_2813_47 HRGMv2_2813_47_3 5372 6889 - PPK2 | PPK2
TC HRGMv2_2813_47 HRGMv2_2813_47_4 6902 8200 - 2.A.86.1.8
TC HRGMv2_2813_47 HRGMv2_2813_47_5 8235 9107 - 2.A.115.1.1
Gene ID: HRGMv2_2813_47_1
Type: TC
Location: 89 - 952 (-)
Gene ID: HRGMv2_2813_47_2
Type: CAZyme
Location: 1163 - 4783 (-)
Gene ID: HRGMv2_2813_47_3
Type: pfam
Location: 5372 - 6889 (-)
Gene ID: HRGMv2_2813_47_4
Type: TC
Location: 6902 - 8200 (-)
Gene ID: HRGMv2_2813_47_5
Type: TC
Location: 8235 - 9107 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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