Cluster: HRGMv2_2813_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2813
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2813_36 | HRGMv2_2813_36_6 | 1934 | 3637 | - | GH23 |
| peptidase | HRGMv2_2813_36 | HRGMv2_2813_36_7 | 3677 | 4444 | - | C60.UPB |
| pfam | HRGMv2_2813_36 | HRGMv2_2813_36_8 | 4451 | 4852 | - | DUF6075 |
| TC | HRGMv2_2813_36 | HRGMv2_2813_36_9 | 4866 | 7196 | - | 3.A.7.7.1 |
Gene ID: HRGMv2_2813_36_6
Type: CAZyme
Location: 1934 - 3637 (-)
Type: CAZyme
Location: 1934 - 3637 (-)
Gene ID: HRGMv2_2813_36_7
Type: peptidase
Location: 3677 - 4444 (-)
Type: peptidase
Location: 3677 - 4444 (-)
Gene ID: HRGMv2_2813_36_8
Type: pfam
Location: 4451 - 4852 (-)
Type: pfam
Location: 4451 - 4852 (-)
Gene ID: HRGMv2_2813_36_9
Type: TC
Location: 4866 - 7196 (-)
Type: TC
Location: 4866 - 7196 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Pseudoruminococcus
Species
Pseudoruminococcus sp902765855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.