Cluster: HRGMv2_2813_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2813
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2813_32 | HRGMv2_2813_32_5 | 5751 | 8528 | - | CBM41 | GH13_14 |
| NULL(UNKNOWN) | HRGMv2_2813_32 | HRGMv2_2813_32_6 | 8848 | 9213 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_2813_32 | HRGMv2_2813_32_7 | 9429 | 10709 | + | Aminotran_1_2 |
| TC | HRGMv2_2813_32 | HRGMv2_2813_32_8 | 10905 | 12347 | + | 2.A.6.4.2 |
| TC | HRGMv2_2813_32 | HRGMv2_2813_32_9 | 12350 | 13354 | + | 2.A.6.4.2 |
Gene ID: HRGMv2_2813_32_5
Type: CAZyme
Location: 5751 - 8528 (-)
Type: CAZyme
Location: 5751 - 8528 (-)
Gene ID: HRGMv2_2813_32_6
Type:
Location: 8848 - 9213 (-)
Type:
Location: 8848 - 9213 (-)
Gene ID: HRGMv2_2813_32_7
Type: STP
Location: 9429 - 10709 (+)
Type: STP
Location: 9429 - 10709 (+)
Gene ID: HRGMv2_2813_32_8
Type: TC
Location: 10905 - 12347 (+)
Type: TC
Location: 10905 - 12347 (+)
Gene ID: HRGMv2_2813_32_9
Type: TC
Location: 12350 - 13354 (+)
Type: TC
Location: 12350 - 13354 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Pseudoruminococcus
Species
Pseudoruminococcus sp902765855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.