Cluster: HRGMv2_2813_CGC14
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2813
- CGC Family ID: CGCFAM_02983
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2813_24 | HRGMv2_2813_24_14 | 13205 | 15613 | + | GT35 |
| pfam | HRGMv2_2813_24 | HRGMv2_2813_24_15 | 15781 | 16368 | + | Hexapep | Mac | Hexapep_2 |
| TC | HRGMv2_2813_24 | HRGMv2_2813_24_16 | 16508 | 17905 | + | 2.A.66.1.32 |
Gene ID: HRGMv2_2813_24_14
Type: CAZyme
Location: 13205 - 15613 (+)
Type: CAZyme
Location: 13205 - 15613 (+)
Gene ID: HRGMv2_2813_24_15
Type: pfam
Location: 15781 - 16368 (+)
Type: pfam
Location: 15781 - 16368 (+)
Gene ID: HRGMv2_2813_24_16
Type: TC
Location: 16508 - 17905 (+)
Type: TC
Location: 16508 - 17905 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Pseudoruminococcus
Species
Pseudoruminococcus sp902765855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.